BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028H08LP1|AL428982
(380 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1104 680 0.0
>3x_Contig1104
Length = 4895
Score = 680 bits (337), Expect = 0.0
Identities = 362/375 (96%), Gaps = 1/375 (0%)
Strand = Plus / Minus
Query: 6 aactgtgccgcaacggttatcatagtgaaaaaagagttatgggtagccatatatgtagct 65
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2864 aactgttccgcaacggttatcatagtgaaaaaagagttatgggtagccatatatgtagct 2805
Query: 66 tctaacatctgggcgaaaccagcaacggctcstataagcccttctatwaactggaaagtt 125
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 2804 tctaacatctgggcgaaaccagcaacggctcctataagcccttctattaactggaaagtt 2745
Query: 126 gcctgtgttgactctgcaatccccgagggtcctccattcataccgttcataccgtwcatc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2744 gcctgtgttgactctgcaatccccgagggtcctccattcataccgttcataccgttcatc 2685
Query: 186 ccatacattgakccgaaccctcccccatacatcgaccctaaaccaccgccgtacatcgac 245
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2684 ccatacattgatccgaaccctcccccatacatcgaccctaaaccaccgccgtacatcgac 2625
Query: 246 cmtaaaccaaccaccatacatagagccataaccacctccgtacatggrtacaaatccacc 305
| |||||| |||||||||||||||||||||||||||||||||||||| | || |||||||
Sbjct: 2624 cctaaacc-accaccatacatagagccataaccacctccgtacatggatccatatccacc 2566
Query: 306 acmmatggaacccattccatatcctgtacctaaacctccaccatacgccgaaccatatcc 365
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2565 acccatggaacccattccatatcctgtacctaaacctccaccatacgccgaaccatatcc 2506
Query: 366 agacataccattkcg 380
|||||||||||| ||
Sbjct: 2505 agacataccatttcg 2491
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1242
Number of Sequences: 1807
Number of extensions: 1242
Number of successful extensions: 22
Number of sequences better than 1.0e-20: 1
length of query: 380
length of database: 10,358,551
effective HSP length: 15
effective length of query: 365
effective length of database: 10,331,446
effective search space: 3770977790
effective search space used: 3770977790
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.3 bits)